Based on core description, thin section identification, X-ray diffraction analysis, scanning electron microscopy, low-temperature gas adsorption and high-pressure mercury intrusion porosimetry, the shale lithofacies of Shan₂³ sub-member of Permian Shanxi Formation in the east margin of Ordos Basin was systematically analyzed in this study. The Shan₂³sub-member has six lithofacies, namely, low TOC clay shale (C-L), low TOC siliceous shale (S-L), medium TOC siliceous shale (S-M), medium TOC hybrid shale (M-M), high TOC siliceous shale (S-H), and high TOC clay shale (C-H). Among them, S-H is the best lithofacies, S-M and M-M are the second best. The C-L and C-H lithofacies, mainly found in the upper part of Shan₂³ sub-member, generally developed in tide-dominated delta facies; the S-L, S-M, S-H and M-M shales occurring in the lower part of Shan₂³ sub-member developed in tide-dominated estuarine bay facies. The S-H, S-M and M-M shales have good pore structure and largely organic matter pores and mineral interparticle pores, including interlayer pore in clay minerals, pyrite intercrystalline pore, and mineral dissolution pore. C-L and S-L shales have mainly mineral interparticle pores and clay mineral interlayer pores, and a small amount of organic matter pores, showing poorer pore structure. The C-H shale has organic micro-pores and a small number of interlayer fissures of clay minerals, showing good micro-pore structure, and poor meso-pore and macro-pore structure. The formation of favorable lithofacies is jointly controlled by depositional environment and diagenesis. Shallow bay-lagoon depositional environment is conducive to the formation of type II₂ kerogen which can produce a large number of organic cellular pores. Besides, the rich biogenic silica is conducive to the preservation of primary pores and enhances the fracability of the shale reservoir.